I10 Whole Genome Sequencing (WGS) of S. Pneumonaie

Form Approved OMB Control No.: 0920-1310 Expiration date: XX/XX/XXXX

Annual Evaluation and Performance Measurement Report (I.10- WHOLE GENOME SEQUENCING (WGS) OF S. PNEUMONIAE)

Annually, each funded laboratory is required to report to CDC evaluation and performance measures. Data are used to indicate progress made toward program outcomes. These summary reports have to be uploaded to the ELC CAMP at the end of each funding year. Required performance measures are listed below.

1. Proportion of S. pneumoniae isolates tested by WGS and AST that passed QC in accordance with CDC protocol:

a. Numerator: Number of targeted isolates tested by WGS and AST that passed QC (see guidance for sequencing priorities)

b. Denominator: Total number of targeted isolates tested by WGS and AST.

c. Calculated: Percent of S. pneumoniae tested by WGS and AST of submission that passed QC in accordance with CDC protocol

2. Number and type of targeted organisms (i.e., healthcare associated organisms prioritized by CDC) tested by WGS and AST

1. Number of targeted organisms tested by WGS and AST Type of targeted organisms tested by WGS

3. Median and range (in days) from date of receipt at public health laboratory to upload of sequence data to NCBI:

a. Median (in days)

b. Range (in days)

Public reporting burden of this collection of information is estimated to average 20 minutes per response, including the time for reviewing instructions, searching existing data sources, gathering and maintaining the data needed, and completing and reviewing the collection of information.  An agency may not conduct or sponsor, and a person is not required to respond to a collection of information unless it displays a currently valid OMB Control Number.  Send comments regarding this burden estimate or any other aspect of this collection of information, including suggestions for reducing this burden to CDC/ATSDR Reports Clearance Officer, 1600 Clifton Road NE, MS H21-8, Atlanta, Georgia 30333; ATTN: PRA 0920-1310